Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939212.1_cds_XP_016483895.1_74965
CDS Infomation

[gene=LOC107804502] [db_xref=GeneID:107804502] [protein=abscisic acid 8'-hydroxylase 4-like] [protein_id=XP_016483895.1] [location=join(14210..14412,14512..14836,14926..15075,15177..15425,15897..15986,16077..16155,16275..16381,16497..16615,17560..17695)] [gbkey=CDS]
Sequence

ATGGAGACTGTGTTTTCCATGATTTATTTCCTTCTCTTTCTCTCAACTCTTCTCTTGTAT
CACGTACCAAAGATTAAACAAAAAGGAAAAGACATAGAAAAAGCAAAGTTGCCTCCTGGT
ACAATGGGGTGGCCTTACATAGGGGAAACTCTCCAAATGTACTCTGAAGACCCAAATGTC
TTCTTTGCTAATAAACAAAAAAGATATGGGGATATATTCAAGACACACATTCTTGGATGC
CCTTGTGTTATGCTAGCTAGCCCCGAAGCTGCACGATTCGTGCTGGTTACTAATGCTCAC
TTATTCAAACCGACGTACCCAAGGAGCAAAGAGAGAATGATTGGCCCTTCTGCTTTGTTC
TTTCACCAAGGGAACTACCATTCTCGACTAAGGAAGATGGTTCAGAACTCGTTATCTCCT
GAGGCTCTTCGAAATCTAGTTCAAGACATCGAGGCCCTATCTATTTGTTCACTGGAATCA
TGGGCAACAAAAGAGCAAGTAATCAACACATTCCACGAGATGAAGAAGTTGTCATTTGAA
GTTGGCATTCTTGCTATCTTTGGTCAATTGGACACAAAGCGCAAAGAGGAGCTAATGGAG
AACTATTGCATAGTAAATAAAGGATACAATTCGTTCCCTACAAACTTATCAGGAACCGCA
TATTACAAAGCTACAAAGGCAAGGAGAAAGCTCTATGAGATAATTAGTGAAATAATTTGT
GAAAGGAAGGAGAAGAAAACAGTAGTTAAGGATCTCTTGGGTCGTCTATTAAATTTCAAA
GATGAAAAGGGACATACTTTAACGGAAGATCAAATTGCCGACAATATAATTGGAGTACTC
TTTGCTGCGCAAGATACAACAGCTAGTGCTCTAACTTGGATTCTCAAATACCTTCATTAC
GAACACAAAATATTACAAGCAGTTAAGGTGGAACAGATAGAAATTTATGAGTCTAATGAA
GAAGGAAAGAAGCCCTTGACATGGATTCAAACTAGAAATATGCCATTTACACACCGGGTC
ATTTTAGAGAGTTTAAGAATGTCAAGCATTATATCTTTCACCTTTAGAGAAGCCGTGACA
GACGTATTTTACGACGGATACTTAATTCCAAAAGGTTGGAAGGTCATGCCATTATTCAGA
AACATTCATCATAATCCAGACTTTTTTGCTGACCCTTGGGATTTTGATCCTTCCAGATTT
GACGCTGCTCCAAAACCCAATACCTATATGCCATTTGGCAATGGAGCCCATGCTTGTCCA
GGGAATGAACTTGCAAAACTGCTCATGCTGATTTTAATCCATCATCTAGTCACCAACTAT
AGGTGGGAAGTCATAGGTTCTCAGGGCGTGATACAGTATAGCCCGTTTCCGGTACCTCAA
CATGGACTCCCTGCCAGGTTCTGGAAGGAAAACAAAAGCACAAAGTATCCCGGGGAAACG
AGATGCCCACTAACATAA

Peptide Sequence

PEP ID

XP_016483895.1
PEP Infomation

PREDICTED: abscisic acid 8'-hydroxylase 4-like [Nicotiana tabacum]
Sequence

METVFSMIYFLLFLSTLLLYHVPKIKQKGKDIEKAKLPPGTMGWPYIGETLQMYSEDPNV
FFANKQKRYGDIFKTHILGCPCVMLASPEAARFVLVTNAHLFKPTYPRSKERMIGPSALF
FHQGNYHSRLRKMVQNSLSPEALRNLVQDIEALSICSLESWATKEQVINTFHEMKKLSFE
VGILAIFGQLDTKRKEELMENYCIVNKGYNSFPTNLSGTAYYKATKARRKLYEIISEIIC
ERKEKKTVVKDLLGRLLNFKDEKGHTLTEDQIADNIIGVLFAAQDTTASALTWILKYLHY
EHKILQAVKVEQIEIYESNEEGKKPLTWIQTRNMPFTHRVILESLRMSSIISFTFREAVT
DVFYDGYLIPKGWKVMPLFRNIHHNPDFFADPWDFDPSRFDAAPKPNTYMPFGNGAHACP
GNELAKLLMLILIHHLVTNYRWEVIGSQGVIQYSPFPVPQHGLPARFWKENKSTKYPGET
RCPLT

Transcript Sequence

Gene sequence data has not been registered.